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Table 4 Chromosome 14 (−) strand chromatin Ig heavy chain locus diversity (D)-to-joining (J) recombination sequence for allele 1 (IGHM) before VDJ

From: B-cell antibody class switchings are pressuromodulated events: Part II, gene recombination

Germline gene

Germline gene episode category, initial no. of sub-episode blocks (converted final no. of sub-episode blocks, or n/a)1

Germline gene 2-digit (3-digit) esebssiwaagoTQ

with respect to Non-germline recombined gene (Step 1 of 2)

Non-germline gene, or n/a

Non-germline gene category, initial no. of sub-episode blocks (converted final no. of sub-episode blocks, or n/a)a

Non-germline gene 2-digit (3-digit) esebssiwaagoTQ

Step (1 of 1, or 2a, 2b of 2)b

IGHD1–20 (nf)*

7 (7)

0.41 (0.406)

IGHD1–20- IGHJ5 (1 of 2)

IGHD3–10

7 (5)

0.40 (0.402)

2a of 2

IGHD3–10

7 (n/a)

0.34 (0.342)

IGHJ6

7 (n/a)

0.10 (0.101)

2a of 2

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD3–10-IGHJ6

7 (5)

0.23 (0.231)

2b of 2

IGHD1–20 (nf)*

7 (7)

0.41 (0.406)

IGHD1–20- IGHJ5 (1 of 2)

IGHD4–17

7 (n/a)

0.15 (0.150)

2a of 2

IGHD4–17

7 (9)

0.31 (0.310)

IGHJ6

7 (n/a)

0.10 (0.101)

2a of 2

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD4–17-IGHJ6

7 (n/a)

0.13 (0.130)

2b of 2

IGHD1–20 (nf)*

7 (7)

0.41 (0.406)

IGHD1–20- IGHJ5 (1 of 2)

IGHD6–19

7 (n/a)

0.23 (0.233)

2a of 2

IGHD6–19

7 (5)

0.31 (0.309)

IGHJ6

7 (n/a)

0.10 (0.101)

2a of 2

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD6–19-IGHJ6

7 (5)

0.19 (0.194)

2b of 2

IGHD1–20 (nf)*

7 (7)

0.41 (0.406)

IGHD1–20- IGHJ5 (1 of 2)

IGHD3–16

7 (5)

0.18 (0.177)

2a of 2

IGHD3–16

7 (n/a)

0.31 (0.308)

IGHJ6

7 (n/a)

0.10 (0.101)

2a of 2

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD3–16-IGHJ6

7 (n/a)

0.23 (0.233)

2b of 2

IGHD1–20 (nf)*

7 (7)

0.41 (0.406)

IGHD1–20-IGHJ5 (1 of 2)

IGHD2–2

7 (n/a)

0.30 (0.296)

2a of 2

IGHD2–2

7 (n/a)

0.30 (0.301)

IGHJ6

7 (n/a)

0.10 (0.101)

2a of 2

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD2–2-IGHJ6

7 (3)

0.30 (0.297)

2b of 2

IGHD1–20 (nf)*

7 (7)

0.41 (0.406)

IGHD1–20- IGHJ5 (1 of 2)

IGHD2–8

7 (n/a)

0.24 (0.238)

2a of 2

IGHD2–8

7 (n/a)

0.30 (0.295)

IGHJ6

7 (n/a)

0.10 (0.101)

2a of 2

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD2–8-IGHJ6

7 (n/a)

0.20 (0.196)

2b of 2

IGHD2–15

7 (n/a)

0.29 (0.294)

n/a

IGHD2–15- IGHJ5

7 (n/a)

0.25 (0.251)

1 of 1

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD1–14

7 (n/a)

0.29 (0.292)

n/a

IGHD1–14- IGHJ5

7 (n/a)

0.15 (0.149)

1 of 1

IGHJ5

7 (n/a)

0.24 (0.235)

IGHD6–13

7 (n/a)

0.29 (0.286)

n/a

IGHD6–13- IGHJ5

7 (9)

0.20 (0.205)

1 of 1

IGHJ5

7 (n/a)

0.24 (0.235)

  1. a> 11,864 ≤ 265,005 total transcribed bases, Episode category 2 gene; Episode category 3 gene bases, ≤ 11,864 total transcribed bases, Episode category 3 gene. b >  11,864 ≤ 265,005 total transcribed bases, Episode category 2 gene; Episode category 3 gene bases, ≤ 11,864 total transcribed bases, Episode category 3 gene. b40% of D-to-J recombinations are 2-step (step 1, J5; step 2 J6) and 10% of D-to-J recombinations are 1-step (step-1, J5 only). *nf Non-functional