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Table 4 Characteristics of biological process, molecular function and KEGG pathways of protein–protein interaction of anaerobic and aerobic Mycoplasma Fermentans with STRING 10.0

From: Proteome analysis of Mycoplasma fermentans cultured under aerobic and anaerobic conditions

A. MFI Anaerobic
Biological Process (GO)
Pathway ID Pathway description matching protein
GO.0044267 cellular protein metabolic process arcA,lysS,rplB,rplQ,tuf
GO.1901566 organonitrogen compound biosynthetic process arcA,lysS,rplB,rplQ,tuf
GO.0006412 translation lysS,rplB,rplQ,tuf
GO.0044249 cellular biosynthetic process arcA,lysS,rplB,rplQ,tuf
GO.0010467 gene expression lysS,rplB,rplQ,tuf
GO.0008152 metabolic process arcA,licA,lysS,rplB,rplQ,tuf
GO.0006520 cellular amino acid metabolic process arcA,lysS
Molecular Function (GO)
GO.0003674 molecular_function arcA,licA,lysS,rplB,rplQ,tuf
GO.0003824 catalytic activity arcA,licA,lysS,rplB,tuf
KEGG Pathways
03020 RNA polymerase rpoA,rpoB,rpoC
00230 Purine metabolism dnaE,dnaX,hpt,rpoA,rpoB,rpoC
01110 Biosynthesis of secondary metabolites arcA,asnA,eno,fba,hpt,rpiB
01100 Metabolic pathways arcA,asnA,dnaE,dnaX,eno,fba,hpt,rpiB,rpoA,rpoB,rpoC
B. MFI Aerobic
Biological Process (GO)
Pathway ID Pathway description matching protein
GO:0044267 cellular protein metabolic process dnaK,lysS,rpsS,tuf
GO:0008152 metabolic process dnaK,licA,lysS,rpsS,tuf
GO:0006412 translation lysS,rpsS,tuf
GO:0010467 gene expression lysS,rpsS,tuf
Molecular Function (GO)
GO:0003674 molecular_function dnaK,licA,lysS,rpsS,tuf
GO:0003676 nucleic acid binding lysS,rpsS,tuf
GO:0032550 purine ribonucleoside binding dnaK,lysS,tuf
GO:0032555 purine ribonucleotide binding dnaK,lysS,tuf
GO:0035639 purine ribonucleoside triphosphate binding dnaK,lysS,tuf
GO:0097159 organic cyclic compound binding dnaK,lysS,rpsS,tuf
GO:1901363 heterocyclic compound binding dnaK,lysS,rpsS,tuf
GO:0005524 ATP binding dnaK,lysS
GO:0003723 RNA binding rpsS,tuf
KEGG Pathways
03010 Ribosome rplL, rpsB, rpsC, rpsD, rpsE, rpsG, rpsI, rpsJ, rpsK, rpsM, rspQ, rpsS
03430 Mismatch Repair dnaX, dnaE, pcrA
00230 Purine metabolism dnaE,dnaX, rpoA