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Table 7 Antigenic, non-allergic and non-toxic MHCII epitopes

From: Vaccine design of coronavirus spike (S) glycoprotein in chicken: immunoinformatics and computational approaches

Core Sequence

Antigenicity

Peptide Sequence

Start

End

Allele

IC50

IIFILILGW

0.6914

IAFATIIFILILGWV

1100

1114

HLA-DRB1*15:01

454.6

KKSSYYTTF

0.6749

MSKCGKKSSYYTTFD

1134

1148

HLA-DPA1*01:03/DPB1*02:01

872.7

SKCGKKSSYYTTFD

1135

1149

HLA-DPA1*01/DPB1*04:01

408.1

HLA-DPA1*01:03/DPB1*02:01

301.5

HLA-DPA1*02:01/DPB1*05:01

953.4

KCGKKSSYYTTFDND

1136

1150

HLA-DPA1*01/DPB1*04:01

276.8

HLA-DPA1*02:01/DPB1*05:01

853.9

CGKKSSYYTTFDNDV

1137

1151

HLA-DPA1*02:01/DPB1*05:01

958.9

MSKCGKKSSYYTTFD

1134

1148

HLA-DPA1*01:03/DPB1*02:01

872.7

KSSYYTTFD

0.6466

MSKCGKKSSYYTTFD

1134

1148

HLA-DRB1*04:05

155

SKCGKKSSYYTTFDN

1135

1149

HLA-DRB1*04:05

125.6

KCGKKSSYYTTFDND

1136

1150

HLA-DRB1*04:05

92.2

CGKKSSYYTTFDNDV

1137

1151

HLA-DRB1*04:05

51.9

GKKSSYYTTFDNDVV

1138

1152

HLA-DRB1*04:05

46.9

KKSSYYTTFDNDVVT

1139

1153

HLA-DRB1*04:05

45.3

TARDMYMPR

0.7901

SYYITARDMYMPRAI

981

995

HLA-DRB1*03:01

269.3

YYITARDMYMPRAIT

982

996

HLA-DRB1*03:01

281.9

YITARDMYMPRAITA

983

997

HLA-DRB1*03:01

618.8

YITARDMYM

1.1865

QVNGSYYITARDMYM

977

991

HLA-DRB1*01:01

22

HLA-DRB1*04:01

145

HLA-DRB1*04:04

331.2

HLA-DRB1*07:01

20.3

HLA-DRB3*01:01

550.7

HLA-DRB5*01:01

227.8

VNGSYYITARDMYMP

978

992

HLA-DQA1*01:02/DQB1*06:02

338.6

HLA-DRB1*01:01

25.8

HLA-DRB1*03:01

447.6

HLA-DRB1*04:01

105.8

HLA-DRB1*04:04

248.3

HLA-DRB1*07:01

27.8

HLA-DRB1*15:01

380.6

HLA-DRB3*01:01

577.8

HLA-DRB5*01:01

198.6

NGSYYITARDMYMPR

979

993

HLA-DQA1*01:02/DQB1*06:02

393.3

HLA-DQA1*05:01/DQB1*03:01

817.3

HLA-DRB1*01:01

19.8

HLA-DRB1*03:01

176.5

HLA-DRB1*04:01

65.2

HLA-DRB1*04:04

225

HLA-DRB1*07:01

40.2

HLA-DRB1*15:01

291.2

HLA-DRB3*01:01

635

HLA-DRB5*01:01

93.5

GSYYITARDMYMPRA

980

994

HLA-DQA1*01:02/DQB1*06:02

218

HLA-DRB1*01:01

14

HLA-DRB1*03:01

197.3

HLA-DRB1*04:01

47.8

HLA-DRB1*04:04

242.4

HLA-DRB1*07:01

57.3

HLA-DRB1*15:01

288.6

HLA-DRB3*01:01

780.4

HLA-DRB5*01:01

61.4

SYYITARDMYMPRAI

981

995

HLA-DRB1*01:01

23.1

HLA-DRB1*04:01

65.3

HLA-DRB1*04:04

249.2

HLA-DRB1*04:05

356.4

HLA-DRB1*07:01

72.2

HLA-DRB1*15:01

284.7

HLA-DRB5*01:01

87.4

YYITARDMYMPRAIT

982

996

HLA-DRB1*01:01

40.8

HLA-DRB1*04:01

108.8

HLA-DRB1*04:04

269.1

HLA-DRB1*04:05

706.3

HLA-DRB1*07:01

160.6

HLA-DRB5*01:01

121.3

YITARDMYMPRAITA

983

997

HLA-DRB1*04:01

145.4

HLA-DRB1*04:04

652.4

HLA-DRB1*07:01

355.4

HLA-DRB1*08:02

955

HLA-DRB5*01:01

206.9

YYITARDMY

0.8845

IQVNGSYYITARDMY

976

990

HLA-DQA1*05:01/DQB1*02:01

491.6

HLA-DRB1*04:01

723.4

HLA-DRB1*04:04

819.7

HLA-DRB1*11:01

72

HLA-DRB1*11:01

72

QVNGSYYITARDMYM

977

991

HLA-DPA1*01/DPB1*04:01

710.8

HLA-DPA1*01:03/DPB1*02:01

875.8

HLA-DQA1*05:01/DQB1*02:01

292.7

HLA-DRB1*03:01

588

HLA-DRB1*11:01

32.4

HLA-DRB1*11:01

32.4

HLA-DPA1*01/DPB1*04:01

557.6

HLA-DPA1*01:03/DPB1*02:01

860.8

HLA-DQA1*05:01/DQB1*02:01

311.9

HLA-DRB1*11:01

17.9

HLA-DRB1*11:01

17.9

NGSYYITARDMYMPR

979

993

HLA-DPA1*01/DPB1*04:01

503

HLA-DPA1*01:03/DPB1*02:01

763.2

HLA-DQA1*05:01/DQB1*02:01

387.6

HLA-DRB1*09:01

858.7

HLA-DRB1*09:01

858.7

HLA-DRB1*11:01

11

HLA-DRB1*11:01

11

GSYYITARDMYMPRA

980

994

HLA-DPA1*01/DPB1*04:01

504.5

HLA-DPA1*01:03/DPB1*02:01

790.4

HLA-DQA1*05:01/DQB1*02:01

482.9

HLA-DRB1*11:01

15.2

HLA-DRB1*11:01

15.2

SYYITARDMYMPRAI

981

995

HLA-DPA1*01/DPB1*04:01

480

HLA-DPA1*01:03/DPB1*02:01

733.8

HLA-DQA1*05:01/DQB1*02:01

526.3

HLA-DRB1*11:01

26.8

HLA-DRB1*11:01

26.8

YYITARDMYMPRAIT

982

996

HLA-DPA1*01/DPB1*04:01

705.6

HLA-DPA1*01:03/DPB1*02:01

931.5

HLA-DQA1*05:01/DQB1*02:01

678.7

HLA-DRB1*11:01

51.8

HLA-DRB1*11:01

51.8