Skip to main content

Table 1 Top Genes that are specific to healthy, OA, and RA synovium

From: C-C chemokine receptor type 5 links COVID-19, rheumatoid arthritis, and Hydroxychloroquine: in silico analysis

ID

Markers Specific to Healthy

Markers Specific to OA

Markers Specific to RA

Probeset_id

Gene Name

Probeset_id

Gene Name

Probeset_id

Gene Name

1

204180_s_at

ZBTB43

204284_at

PPP1R3C

210538_s_at

BIRC3

2

204131_s_at

FOXO3

217963_s_at

NGFRAP1

217933_s_at

LAP3

3

213649_at

SFRS7

219197_s_at

SCUBE2

204279_at

PSMB9

4

222303_at

 

212256_at

GALNT10

216920_s_at

TARP

5

204243_at

RLF

203478_at

NDUFC1

211798_x_at

IGLJ3

6

222164_at

FGFR1

205330_at

MN1

217281_x_at

IGHV3–7

7

206359_at

SOCS3

218126_at

FAM82A2

209924_at

CCL18

8

201160_s_at

CSDA

210534_s_at

B9D1

217179_x_at

 

9

209682_at

CBLB

202016_at

MEST

214973_x_at

IGHD

10

215330_at

 

204776_at

THBS4

209267_s_at

SLC39A8

11

219228_at

ZNF331

204797_s_at

EML1

218223_s_at

PLEKHO1

12

204748_at

PTGS2

201842_s_at

EFEMP1

211644_x_at

IGKV3–20

13

210764_s_at

CYR61

205364_at

ACOX2

205159_at

CSF2RB

14

218859_s_at

ESF1

214620_x_at

PAM

212956_at

TBC1D9

15

201465_s_at

JUN

210997_at

HGF

206247_at

MICB

16

220046_s_at

CCNL1

219953_s_at

C11orf17

217378_x_at

LOC100130100

17

200921_s_at

BTG1

208792_s_at

CLU

205488_at

GZMA

18

202768_at

FOSB

210302_s_at

MAB21L2

211643_x_at

 

19

209184_s_at

IRS2

219182_at

FLJ22167

205569_at

LAMP3

20

213462_at

NPAS2

215913_s_at

GULP1

211637_x_at

IGHV4–4

21

200702_s_at

DDX24

37408_at

MRC2

205831_at

CD2

22

218880_at

FOSL2

213167_s_at

SLC5A3

213716_s_at

SECTM1

23

210094_s_at

PARD3

207326_at

BTC

209670_at

TRAC

24

207316_at

HAS1

207447_s_at

MGAT4C

206991_s_at

CCR5

25

210180_s_at

SFRS10

222125_s_at

P4HTM

214916_x_at

 

26

208707_at

EIF5

206439_at

EPYC

216401_x_at

LOC652493

27

220266_s_at

KLF4

205127_at

PTGS1

214768_x_at

FAM20B

28

212501_at

CEBPB

218837_s_at

UBE2D4

217480_x_at

LOC339562

29

202340_x_at

NR4A1

209466_x_at

PTN

204891_s_at

LCK

30

211458_s_at

GABARAPL1

205150_s_at

KIAA0644

211645_x_at

 

31

201473_at

JUNB

205898_at

CX3CR1

212314_at

KIAA0746

32

212384_at

BAT1

212713_at

MFAP4

205267_at

POU2AF1

33

200800_s_at

HSPA1A

205817_at

SIX1

219648_at

MREG

34

202014_at

PPP1R15A

201279_s_at

DAB2

210915_x_at

TRBC1

35

204622_x_at

NR4A2

206070_s_at

EPHA3

216576_x_at

IGKC

36

210852_s_at

AASS

205857_at

SLC18A2

217258_x_at

IGL@

37

202861_at

PER1

205638_at

BAI3

213915_at

NKG7

38

222162_s_at

ADAMTS1

206373_at

ZIC1

204613_at

PLCG2

39

215248_at

GRB10

220595_at

PDZRN4

221658_s_at

IL21R

40

214805_at

EIF4A1

218675_at

SLC22A17

202307_s_at

TAP1

41

201810_s_at

SH3BP5

217511_at

KAZALD1

203528_at

SEMA4D

42

202948_at

IL1R1

206726_at

PGDS

203828_s_at

IL32

43

212732_at

MEG3

204933_s_at

TNFRSF11B

201690_s_at

TPD52

44

217911_s_at

BAG3

211958_at

IGFBP5

214777_at

IGKV4–1

45

200768_s_at

MAT2A

221447_s_at

GLT8D2

216207_x_at

IGKV1D-13

46

221031_s_at

APOLD1

205833_s_at

PART1

206082_at

HCP5

47

202672_s_at

ATF3

203440_at

CDH2

208885_at

LCP1

48

212227_x_at

EIF1

204749_at

NAP1L3

1405_i_at

CCL5

49

203752_s_at

JUND

221029_s_at

WNT5B

M97935_3_at

STAT1

50

202431_s_at

MYC

207497_s_at

MS4A2

204116_at

IL2RG

51

213006_at

CEBPD

210372_s_at

TPD52L1

209374_s_at

IGHM

52

201531_at

ZFP36

210006_at

ABHD14A

209606_at

CYTIP

53

203140_at

BCL6

220076_at

ANKH

204533_at

CXCL10

54

36711_at

MAFF

213195_at

LOC201229

202270_at

GBP1

55

208869_s_at

GABARAPL1

204773_at

IL11RA

219386_s_at

SLAMF8

56

209681_at

SLC19A2

219416_at

SCARA3

205890_s_at

GABBR1

57

212665_at

TIPARP

206089_at

NELL1

205242_at

CXCL13

58

202284_s_at

CDKN1A

219561_at

COPZ2

206134_at

ADAMDEC1

59

209305_s_at

GADD45B

206480_at

LTC4S

203915_at

CXCL9

60

203574_at

NFIL3

205475_at

SCRG1

206513_at

AIM2